MARIO-tools
  • MARIO-tools 0.3 documentation
    • Overview
    • Installation
    • Support
  • Analysis pipeline
    • Overview
    • Pipeline
    • Other functions
  • Visualization of local RNA-RNA interactions
    • Prerequirement
    • Run the program to generate visualization
    • Example of result graph
  • Visualization of intra-RNA interactions by heatmap
    • Prerequirement
    • Run the program to generate heatmap for interactions within RNA molecule
    • Example of result graph
  • Visualization of global RNA-RNA interactome
    • Prerequirement
    • Run the program to generate visualization
    • Example of result graph
  • Visualization of interaction types enrichment
    • Prerequirement
    • Run the program to generate visualization for enrichment of different types of interactions
    • Example of result graph
  • Python APIs created for this project
    • Annotation module
    • “annotated_bed” data class
    • “RNAstructure” class
  • Resources of strong interactions from two mouse cell types
    • Description of different samples
    • Resources of Strong Interactions
    • Target of miRNA in mir-290-295 clusters and mmu-mir-703
 
MARIO-tools
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